Manuel B. Garcia

Manuel B. Garcia serves as the Senior Director for Educational Technology and Digital Learning at FEU Institute of Technology, Manila, Philippines. Read More

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When Does Excluding Participants Become Falsification Rather Than a Defensible Analytical Decision?

Excluding participants is not inherently falsification. It becomes an integrity concern when participants are removed without a defensible basis, particularly when exclusions are selected because they produce a preferred result and the research is then represented inaccurately.

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Participant Exclusion and Falsification Guide 454 of 530
01 · The Question

When Is Removing a Participant a Methodological Decision, and When Is It Manipulation?

A participant turns out to be ineligible. Another does not complete the intervention. Someone fails an attention check. A participant produces an extreme score. Another participant's data make a statistically significant effect disappear.

All five might eventually be excluded from an analysis, but those exclusions are not scientifically equivalent.

Participant exclusion is sometimes necessary for a valid analysis. It can also become a convenient mechanism for removing evidence that does not support the desired conclusion. The critical issue is why the participant is excluded and whether the resulting research record accurately represents the study that was conducted.

02 · The Short Answer

Participant Exclusion Needs a Defensible Reason Independent of the Desired Result

In Brief

Excluding participants is not automatically falsification. Exclusion can be scientifically defensible when based on appropriate eligibility requirements, protocol-defined criteria, data-quality problems, or justified analytical rules, but selectively omitting participants can become falsification when it causes the research to be inaccurately represented in the research record.

Prespecified criteria can reduce outcome-driven discretion, but prespecification is not the only test. Researchers should also consider scientific justification, consistent application, timing, documentation, the treatment of comparable participants, sensitivity of the findings, and whether exclusions are accurately reported.

03 · What You Need to Know

Participant Exclusion Is Not One Decision but Several Different Decisions

First Ask What “Excluded” Actually Means

Researchers often say that a participant was “excluded” without specifying from what.

A person might be screened out before enrollment because they do not meet eligibility criteria. An enrolled participant might be excluded from one particular analysis because the relevant outcome is missing. A participant might remain in the primary analysis but be omitted from a secondary per-protocol analysis. Another might be removed from every analysis because the researcher later decides the person's results are inconvenient.

Those are not interchangeable situations.

Before evaluating an exclusion, identify when it occurred, which dataset or analysis it affects, what rule produced it, and how the participant is represented in the study's records and reporting.

Eligibility Criteria Can Legitimately Exclude People From a Study

Research designs often define who is eligible to participate. Age ranges, diagnostic criteria, prior exposure, enrollment status, language requirements, contraindications, or other characteristics may be scientifically relevant depending on the research question and ethical framework.

If a participant is discovered to have been ineligible under a legitimate study criterion, some form of exclusion may be appropriate. Exactly how their already-collected data should be handled can depend on the protocol, consent, study design, regulatory requirements, statistical analysis plan, and disciplinary norms.

The important point is that “ineligible” provides a potentially substantive reason. “Their result is inconvenient” does not.

Protocol Deviations Do Not Automatically Require Participant Removal

Participants do not always follow research protocols perfectly. They miss sessions, take prohibited medication, fail to complete an intervention, respond outside a specified time window, or otherwise deviate from the planned procedure.

Whether such participants should be excluded depends on the research design and analysis. In randomized trials, for example, excluding participants after randomization can alter the benefits of random allocation and potentially bias treatment comparisons. A per-protocol analysis answers a different question from an intention-to-treat analysis.

Researchers should therefore resist the intuitive but potentially damaging assumption that “did not follow the protocol perfectly” means “delete this participant.”

Missing Data Does Not Necessarily Mean the Participant Should Disappear

If a participant lacks one outcome, researchers may be unable to include that individual in a particular analysis. That does not necessarily justify removing all of the participant's other valid data or pretending that the person was never enrolled.

Missing-data handling is an analytical problem with methods and assumptions of its own. The correct approach depends on the design, pattern and mechanism of missingness, statistical method, and research question.

Whole-participant deletion can discard considerably more information than the missing value itself.

Attention Checks Need More Thought Than “Pass or Delete”

Attention checks are common in some survey and behavioral research, but their presence does not make every exclusion based on them automatically defensible.

Researchers should consider whether the check validly measures the response-quality problem of concern, whether the exclusion criterion was established appropriately, whether participants had a reasonable opportunity to satisfy it, and whether the rule is applied consistently.

A particularly concerning pattern would be inspecting the outcome first and invoking an attention check only for participants whose responses weaken the hypothesis.

An Extreme Participant Is Not Necessarily an Invalid Participant

Participants can be unusual without being erroneous.

A very high or low outcome may reflect a genuine person at the tail of the population distribution. Removing that participant because the value looks strange can narrow the apparent variation in the population and exaggerate the stability of the result.

Investigate whether the extreme observation reflects measurement error, eligibility problems, data-entry error, protocol failure, or a genuine observation. The distinction between removing invalid data and removing inconvenient data applies just as strongly when the unit being removed is an entire participant.

Prespecified Criteria Reduce Discretion but Do Not Automatically Make Exclusion Correct

Defining exclusion criteria before outcomes are known can reduce opportunities for researchers to tailor the sample to the desired result. Preregistration, protocols, and statistical analysis plans can therefore strengthen the credibility of exclusion decisions.

Still, a prespecified criterion can be poorly designed. Conversely, a legitimate exclusion may become necessary only after an unforeseen problem is discovered.

Prespecification is evidence about the decision process, not a magical stamp of methodological validity.

Changing Exclusion Rules After Seeing Outcomes Requires Particular Scrutiny

Suppose a protocol excludes participants who complete less than 70% of an intervention. After seeing the results, the researcher notices that changing the threshold to 80% removes several participants from the treatment group and makes the effect statistically significant.

The researcher may be able to propose a scientific argument for 80%. But because the preferred outcome was already known, the decision now has an obvious competing explanation.

This does not mean that all post hoc changes are misconduct. It does mean that the researcher should preserve the original plan, explain the change, justify it independently, and consider reporting analyses under both specifications.

Selective Application of the Same Rule Is a Major Warning Sign

Imagine that two participants fail the same attention check. One strongly supports the hypothesis; the other strongly contradicts it. Removing only the second participant is difficult to explain through the attention-check criterion itself.

Similarly, if the researcher labels an extreme low score “invalid” while retaining an equally extreme high score because it supports the desired effect, the stated exclusion rule is not being applied symmetrically.

Selective inclusion and omission of data points has appeared in actual ORI research misconduct findings. The broader lesson is that the scientific rationale should determine who meets the criterion, rather than the participant's contribution to the preferred result.

Participant Exclusion Can Fall Within Falsification

The U.S. Public Health Service defines falsification as manipulating research materials, equipment, or processes, or changing or omitting data or results such that the research is not accurately represented in the research record.

The Federal Research Misconduct Policy also explicitly recognizes that omission can sometimes be appropriate under accepted research practices, while omission is falsification when it misleads readers about the research results.

Accordingly, the question is not simply “Was someone excluded?” It is whether the omission, in context, caused the research record to inaccurately represent the research.

Reporting the Sample Size Accurately Matters

Participant exclusion affects more than the statistical calculation. It can affect descriptions of recruitment, attrition, denominators, participant characteristics, flow diagrams, tables, figures, and methods.

If 150 people contributed data but a researcher selectively analyzes 135, the report should not casually create the impression that only 135 relevant participants ever existed if the omitted participants are material to understanding the research.

Actual ORI findings have included cases involving falsely reported numbers of data points and selective omission or inclusion in analyses. Accurate accounting of the analytical sample is therefore part of accurately representing the research record.

One Participant Can Matter Even in a Large Dataset

Researchers sometimes reason that removing one participant from a large sample cannot matter ethically because the overall result barely changes.

That confuses effect size with integrity.

A legitimate exclusion does not become illegitimate because it changes the conclusion, and an illegitimate exclusion does not become acceptable because it fails to change the conclusion. The primary question remains whether the omission has a defensible basis and the research is represented accurately.

A Poor Exclusion Decision Is Not Automatically Research Misconduct

There is still an important distinction between methodological criticism and a formal misconduct finding.

Under the PHS framework, research misconduct does not include honest error or honest differences of opinion. A finding requires a significant departure from accepted practices of the relevant research community, intentional, knowing, or reckless conduct, and proof by a preponderance of the evidence.

Researchers can therefore disagree legitimately about whether a participant should be included. The mere existence of that disagreement does not establish falsification.

Watch Out

If you decide whether a participant is “invalid” only after learning whether that participant helps or hurts your hypothesis, you have introduced the outcome into the exclusion rule. That does not automatically prove misconduct, but it creates a serious risk of biased and potentially misleading analysis.

04 · A Practical Example

The Same Participant Can Look Excludable for Very Different Reasons

Hypothetical Example

A Participant Who Did Not Complete the Intervention

A randomized educational intervention enrolls 160 students. One student assigned to the intervention attends only one of eight sessions but completes the final outcome assessment.

The original analysis plan The primary analysis includes all randomized participants according to their assigned groups. A secondary per-protocol analysis includes only students who attend at least six sessions.
Defensible treatment The student remains in the prespecified primary analysis but is excluded from the per-protocol analysis. The report explains both analytical populations and their criteria.
A different decision After seeing that the student's outcome weakens the intervention effect, the researcher removes the student from the primary analysis too, even though the original rule requires inclusion.
What happens next The effect becomes statistically significant. The researcher reports only the revised analysis and gives the impression that the exclusion followed the original methodology.
Why the second situation is concerning The participant was not removed because new evidence established that the data were invalid. The exclusion was outcome-driven and the resulting report conceals a consequential departure from the stated analysis.

The ethical and methodological difference lies in the rationale and representation, not merely in the fact that one version of the analysis contains 159 participants instead of 160.

05 · What Researchers Often Get Wrong

Common Misunderstandings About Excluding Participants

Misconception

Anyone Who Violates the Protocol Should Be Removed

Not necessarily. Protocol deviations can have different implications depending on the study design and estimand. In some designs, excluding participants because they did not adhere to the intervention can introduce bias rather than eliminate it.

Misconception

A Participant With Missing Data Must Be Deleted Completely

Missing one variable does not automatically invalidate everything else the participant contributed. Appropriate handling depends on which information is missing, the analysis, the assumptions involved, and the study design.

Misconception

Prespecified Exclusion Criteria Can Never Be Questioned

Prespecification limits some forms of researcher discretion but does not guarantee that a criterion is methodologically appropriate. Researchers may need to discuss limitations or conduct sensitivity analyses even when following a preplanned rule.

Misconception

A Post Hoc Exclusion Is Automatically Falsification

No. Unexpected eligibility problems, duplicated records, equipment failures, or other genuine issues can emerge after data collection. The later timing makes careful justification and documentation particularly important, but timing alone does not determine misconduct.

Misconception

If Removing the Participant Does Not Change the Conclusion, It Does Not Matter

The magnitude of the statistical effect is not the sole integrity criterion. Researchers should represent the analytical sample accurately even when an improper exclusion would have little effect on the final estimate.

06 · What This Means for You

Separate Eligibility, Data Quality, and Outcome Preference

Before excluding a participant, articulate the reason without referring to whether the participant supports your hypothesis. That simple exercise can expose whether the decision is grounded in the research design or in the desired result.

A simple participant-exclusion framework

If the participant clearly meets a valid prespecified exclusion criterion
Apply the criterion consistently and document where and why the participant is excluded.
If an unexpected problem genuinely compromises the participant's data
Establish the evidence for that problem, define a defensible rule, and apply it consistently to comparable cases.
If only one variable is unusable or missing
Determine whether exclusion is required for that specific analysis rather than automatically deleting the participant from the entire study.
If the reason for exclusion emerges after seeing the participant's outcome
Treat the decision as outcome-sensitive, preserve the original analysis, justify any change independently, and consider reporting sensitivity analyses.
If comparable participants are being treated differently
Stop and determine whether the criterion is actually being applied consistently or selectively according to results.

Keep a record of exclusions and their reasons rather than deleting participants silently from the working file. A transparent participant-flow record can help reconcile recruitment numbers, eligibility, attrition, analysis populations, and reported sample sizes.

If exclusion is part of a broader set of post hoc analytical changes, the concern may extend beyond the participant decision itself. Researchers should also examine whether changing an analysis after seeing the results remains scientifically defensible and accurately represented.

07 · A Quick Checklist

Before Excluding a Participant, Check the Rationale

Before removing a participant from an analysis, check:
Exactly which study population, dataset, or analysis is the participant being excluded from?
What scientific, eligibility, protocol, measurement, or analytical reason supports the exclusion?
Was the criterion specified before outcomes were known, and if not, what new information justified the later decision?
Would you make the same decision if this participant's outcome strongly supported your hypothesis?
Are all participants meeting the same criterion treated consistently?
Have you preserved the participant's original data and documented the exclusion rather than silently deleting the record?
Does the reported sample size and participant flow accurately reflect recruitment, exclusions, attrition, and analysis populations?
If the exclusion materially changes the conclusion, have you considered showing the result under alternative defensible specifications?
08 · Frequently Asked Questions

Frequently Asked Questions About Participant Exclusion

Is excluding a participant ever falsification?

Potentially. Falsification can include omitting data or results such that the research is not accurately represented. A defensible participant exclusion is not automatically falsification, but selectively removing valid participants to create a misleading result can raise that concern.

Can I exclude someone who did not follow the study protocol?

Possibly, depending on the study design and analysis. Protocol nonadherence does not automatically mean all of the participant's data should disappear. In some designs, retaining nonadherent participants in the primary analysis is methodologically important.

Can I exclude participants who fail attention checks?

Potentially, if the attention check and exclusion criterion are methodologically defensible and applied consistently. The decision becomes more concerning if the criterion is introduced or selectively applied after researchers know which participants support the desired outcome.

Can I exclude an extreme participant as an outlier?

Do not assume that an extreme score makes the participant invalid. Investigate the reason for the extreme value and use an analytically defensible approach. Genuine variability should not be removed merely because it is inconvenient.

What if the participant was actually ineligible?

That may provide a legitimate basis for exclusion, but how already-collected data should be handled can depend on the study protocol, analysis plan, consent, regulatory requirements, and disciplinary practice. Document the discovery and the resulting decision.

Can I change an exclusion threshold after seeing the results?

A change is not automatically misconduct, but outcome knowledge creates a risk of biased decision-making. Preserve the original rule, explain and independently justify the revision, and consider reporting results under both specifications when the choice materially affects the conclusion.

Should excluded participants disappear from the reported sample size?

Reporting should accurately distinguish relevant populations such as screened, enrolled, randomized, completed, and analyzed participants as appropriate to the study design. A participant excluded from one analysis should not simply vanish from the research history when their participation is material to understanding the study.

09 · The Bottom Line

Participant Exclusion Is Defensible When the Rule Follows the Science, Not the Desired Outcome

The Bottom Line

Excluding participants is not inherently falsification. It becomes an integrity concern when participants are selectively omitted without a defensible scientific basis and the omission causes the research to be inaccurately represented.

Define exclusion criteria carefully, apply comparable rules consistently, preserve excluded records, distinguish different analytical populations, and scrutinize decisions made after outcomes are known. If your reason for excluding a participant disappears when that participant supports your hypothesis, the rule probably needs another look.

10 · Sources and Further Reading

Authoritative Sources on Participant Exclusion and Falsification

11 · Cite this Guide

How to Cite This Guide

This guide is intended to be read, shared, and used in research, teaching, and academic work. If you draw on its ideas, explanations, or other content, please acknowledge the source by citing the guide. Doing so gives appropriate credit and helps your readers locate the original resource.

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