Manuel B. Garcia

Manuel B. Garcia serves as the Senior Director for Educational Technology and Digital Learning at FEU Institute of Technology, Manila, Philippines. Read More

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Should Sensitivity Analyses Be Planned During Research Design?

Sensitivity analyses help researchers examine whether findings depend on uncertain assumptions or analytical choices. Learn why important sensitivity analyses should be planned during research design, how to select meaningful alternatives, and how to interpret results that change across assumptions.

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Planning Sensitivity Analyses During Research Design Guide 1041 of 1272
01 · The Question

Should You Plan How to Challenge Your Main Analysis Before Collecting Data?

You have selected a research design and identified the statistical analysis that will answer your primary question. You have also made several assumptions about the data, participants, measurements, and analytical methods.

Perhaps you expect missing observations to be adequately explained by recorded variables. You may assume that an observational association can be estimated after adjusting for measured confounders. Alternatively, your chosen statistical model may depend on a particular functional form or definition of the outcome.

What happens if these assumptions are questionable? Should you wait until the primary analysis is complete before investigating alternative assumptions, or should sensitivity analyses be planned while designing the study?

The issue matters because sensitivity analysis is not simply an optional statistical exercise performed after obtaining a result. Some sensitivity analyses require additional measurements, particular data structures, or assumptions that must be considered before recruitment and data collection.

02 · The Short Answer

Plan Important Sensitivity Analyses Early, Especially When They Address Consequential Assumptions

In Brief

Important sensitivity analyses should generally be planned during research design when the credibility of the primary findings depends on uncertain assumptions or analytical decisions. Planning helps researchers identify which assumptions require examination, determine what additional information may be necessary, and distinguish prespecified robustness assessments from analyses selected after observing results.

However, not every possible sensitivity analysis needs to be predetermined. Unexpected problems may justify additional analyses. The essential requirement is to specify the most consequential assumptions prospectively, use scientifically meaningful alternatives, and report how conclusions depend on those assumptions rather than selecting the analysis that produces the preferred result.

03 · What You Need to Know

Designing Sensitivity Analyses That Meaningfully Test Research Conclusions

What Is a Sensitivity Analysis?

A sensitivity analysis examines how a research conclusion changes when specified assumptions, analytical choices, or uncertain parameters are varied.

For example, researchers may estimate an intervention effect under different assumptions about missing outcomes or evaluate how an observational association would change under plausible levels of unmeasured confounding.

The purpose is to investigate the dependence of conclusions on assumptions that cannot be established with complete certainty.

Sensitivity analyses are particularly valuable when different defensible assumptions could produce substantively different interpretations.

However, conducting numerous alternative models does not automatically establish robustness. Each analysis should address an identifiable source of uncertainty and have a defensible scientific rationale.

How Does Sensitivity Analysis Differ From the Primary Analysis?

Primary analysis Implements the principal analytical strategy selected to address the study's main research question under its specified assumptions.
Sensitivity analysis Examines how the primary conclusion depends on alternative assumptions or analytically consequential decisions.

The distinction concerns analytical purpose rather than statistical complexity.

A sensitivity analysis may use a more complicated model than the primary analysis, but complexity alone does not make it more credible.

Researchers should establish which analysis is primary and explain what uncertainty each sensitivity analysis investigates.

How Does Sensitivity Analysis Differ From a Robustness Check?

The terms are sometimes used interchangeably, particularly outside regulated clinical research.

However, sensitivity analysis more explicitly concerns the consequences of varying assumptions, while robustness checks may refer more broadly to examining alternative specifications, measurements, or analytical approaches.

In the ICH E9(R1) framework, sensitivity analyses are specifically intended to assess robustness to assumptions underlying the main estimator for a particular estimand.

Supplementary analyses may instead investigate related questions or alternative estimands.

This distinction is important because changing the scientific question is not the same as testing whether an answer remains stable under different assumptions.

Which Assumptions Commonly Require Sensitivity Analysis?

Source of uncertainty Possible sensitivity analysis Important qualification
Missing outcome data Evaluate plausible departures from the primary missingness assumptions. Alternative methods should correspond to meaningful missingness scenarios.
Unmeasured confounding Quantify how hypothetical confounding could affect an observational estimate. Such analyses do not prove that confounding is absent.
Measurement error Examine plausible misclassification or measurement error scenarios. Assumed error rates require justification.
Model specification Compare defensible functional forms or estimation methods. Alternatives should address a defined modeling uncertainty.
Influential observations Assess the influence of observations under justified diagnostic criteria. Exclusions should not be chosen because they improve significance.
Outcome definitions Examine justified alternative operational definitions. Different outcomes may represent different estimands or constructs.
Selection or attrition Evaluate assumptions about differential inclusion or loss to follow-up. Selection mechanisms may not be identifiable from observed data alone.

Researchers should prioritize uncertainties that are both scientifically plausible and capable of materially affecting the intended conclusion.

Why Should Sensitivity Analyses Be Considered During Research Design?

Planning sensitivity analyses early can reveal information that the primary analysis alone would not require.

For example, evaluating the effects of missing follow-up data may require collecting baseline predictors of attrition and outcomes.

Similarly, assessing measurement error may benefit from a validation subsample or repeated measurements.

If these requirements are identified only after data collection, the necessary information may be unavailable.

Early planning also helps researchers anticipate whether the study's conclusions will depend heavily on assumptions that cannot be examined adequately.

In some cases, this may justify revising the study design rather than relying on statistical sensitivity analyses to compensate for preventable weaknesses.

Should Every Assumption Have a Sensitivity Analysis?

No. Some assumptions are relatively well supported, while others may have little influence on the primary conclusion.

Furthermore, certain assumptions cannot be meaningfully varied using the available data.

Researchers should prioritize assumptions according to their plausibility, importance, uncertainty, and potential consequences.

A useful question is whether a reasonable departure from the assumption could change the substantive interpretation of the result.

If so, a planned sensitivity analysis may be particularly valuable.

However, the number of analyses should not become a substitute for carefully identifying the vulnerabilities of the design.

How Should Sensitivity Analyses Be Selected?

Selection should begin with the assumptions underlying the primary analysis rather than a list of available statistical techniques.

Researchers should identify the uncertainty, describe a scientifically plausible alternative, and specify how the alternative will affect the analysis.

For example, a longitudinal study may assume that missing outcomes are missing at random conditional on observed information.

A sensitivity analysis could examine departures from that assumption using a prespecified range of shifts in imputed outcomes.

The range should reflect substantive knowledge or a transparent scenario-based rationale rather than values chosen after inspecting which assumptions preserve statistical significance.

How Should Missing-Data Sensitivity Analyses Be Planned?

Missing-data sensitivity analyses are particularly important when conclusions depend on assumptions about unobserved outcomes.

Methods such as multiple imputation or likelihood-based analysis often rely on assumptions that cannot be fully verified from the observed data.

For example, missing at random assumes that missingness can be explained by observed information, conditional on the model.

Researchers may examine missing-not-at-random scenarios using pattern-mixture models, selection models, or other suitable approaches.

However, these methods require assumptions about information that is not observed. Their results should therefore be interpreted as conditional on the scenarios examined.

Planning missing-data handling before data collection can help ensure that the study records relevant predictors of missingness.

Can Sensitivity Analysis Address Unmeasured Confounding?

Yes, in the sense that researchers can quantify how hypothetical unmeasured confounding might affect an estimated association or causal effect.

For example, an observational study may estimate an association between educational technology use and academic performance after adjusting for measured baseline characteristics.

A sensitivity analysis can examine how strongly an unmeasured factor would need to relate to both exposure and outcome to explain away the estimated association under specified assumptions.

Methods such as quantitative bias analysis and the E-value provide approaches for examining particular confounding scenarios.

However, they do not establish that unmeasured confounding is absent or that the observed association is causal.

Researchers should select methods appropriate to the effect measure and causal assumptions involved.

Should Alternative Statistical Models Be Included?

Alternative models may be useful when the primary result depends on uncertain functional forms, covariance assumptions, or estimation procedures.

For example, researchers may examine whether an estimated intervention effect is sensitive to a defensible alternative approach for handling classroom clustering.

However, comparing models that estimate different scientific quantities may not constitute a sensitivity analysis of the same estimand.

Researchers should explain whether each alternative tests a modeling assumption or answers a different question.

Model selection should not be driven solely by which specification produces the smallest p-value.

Can Sensitivity Analyses Address Measurement Error?

Yes. Measurement error can distort estimates, particularly when its magnitude or direction differs across participants or groups.

For example, self-reported time spent using an educational platform may differ from actual usage recorded by the system.

Researchers may examine plausible error distributions or use validation information to evaluate how estimates change.

However, the credibility of the analysis depends on the assumptions about measurement error.

Where possible, a validation subsample or independent measurement may strengthen the analysis.

Planning these procedures before data collection can be more informative than attempting to infer measurement error entirely from the final dataset.

Can Sensitivity Analyses Address Outliers?

Potentially, but researchers should distinguish genuine observations from data errors and influential values.

An extreme observation is not necessarily invalid.

For example, a student may legitimately have an unusually high or low assessment score.

Researchers can examine how justified alternative treatments of influential observations affect results, but exclusions should follow defensible criteria.

Removing observations solely because they weaken a preferred conclusion is not a legitimate robustness assessment.

The primary analysis should remain clearly distinguished from alternative analyses involving modified datasets.

What Is a Tipping-Point Analysis?

A tipping-point analysis examines how far an uncertain assumption must change before a specified conclusion changes.

For example, researchers may investigate how unfavorable missing outcomes would need to be before an estimated intervention effect loses statistical significance or crosses a substantively important threshold.

However, statistical significance is not the only possible criterion for a tipping point.

A more substantively useful analysis may examine when the estimated effect falls below a threshold of practical importance.

The plausibility of the tipping-point assumptions must still be evaluated.

A conclusion that changes only under extreme assumptions may be less sensitive than one that changes under modest and credible departures from the primary assumptions.

Should Sensitivity Analyses Be Powered Separately?

There is no universal requirement to conduct a separate power calculation for every sensitivity analysis.

However, anticipated robustness assessments can influence sample-size and data collection planning.

For example, a validation subsample intended to estimate measurement error may require its own precision considerations.

Similarly, analyses relying on rare outcomes or small subgroups may be too imprecise to provide useful evidence.

Researchers should evaluate whether the available data can meaningfully distinguish the scenarios under investigation.

Sensitivity analysis does not create information that the study failed to collect.

Should Sensitivity Analyses Be Prespecified?

Important sensitivity analyses should generally be prespecified when they support the credibility of confirmatory conclusions.

The statistical analysis plan should identify the assumption being varied, the alternative scenarios, the analytical method, and the intended interpretation.

However, unforeseen problems may justify additional analyses after data collection.

These should be reported transparently, with attention to when they were developed and what information was available.

Prespecification reduces opportunities for selective presentation but does not guarantee that the selected scenarios are scientifically appropriate.

How Should Sensitivity Analyses Be Interpreted When Results Agree?

Agreement across analyses may increase confidence that the conclusion is not highly dependent on the particular assumptions examined.

However, several analyses may share the same underlying weakness.

For example, multiple regression specifications may all remain vulnerable to the same unmeasured confounder.

Therefore, consistency across models does not establish that the findings are unbiased or causally valid.

Researchers should describe the scope of robustness demonstrated rather than claim that all possible sources of uncertainty have been eliminated.

What If Sensitivity Analyses Produce Different Conclusions?

Disagreement can be scientifically informative because it identifies assumptions that materially influence the result.

For example, an intervention effect may remain favorable under missing-at-random assumptions but become uncertain under plausible missing-not-at-random scenarios.

Researchers should explain which assumptions produce the different conclusions and evaluate their plausibility.

They should not automatically select the most favorable or most conservative estimate as the definitive answer.

The primary analysis remains important, but the sensitivity results may require a more qualified interpretation of its findings.

Can Sensitivity Analyses Replace a Strong Research Design?

No. Sensitivity analyses help evaluate the consequences of assumptions but cannot reliably compensate for every design weakness.

For example, if a study lacks essential confounder information, a sensitivity analysis may quantify hypothetical bias but cannot recover the missing variables.

Likewise, severe selection bias or inappropriate measurement may prevent defensible inference even when several alternative models produce similar estimates.

Researchers should use sensitivity planning to identify weaknesses that can be addressed through better sampling, measurement, follow-up, or allocation procedures.

The objective is to improve the design where possible and assess residual uncertainty where it cannot be eliminated.

How Should Sensitivity Analyses Be Documented?

The analysis plan should identify the primary analysis, the uncertainty addressed by each sensitivity analysis, the alternative assumptions, and the corresponding estimation procedures.

It should also describe relevant parameters, plausible ranges, and criteria for interpreting changes in conclusions.

Where additional analyses are developed later, their rationale and timing should be recorded.

Reports should present important sensitivity results even when they weaken the apparent strength of the primary finding.

The appropriate detail of the statistical analysis plan depends on the inferential role of these analyses.

Watch Out

Do not conduct numerous alternative models and report only those that preserve the preferred conclusion. A defensible sensitivity analysis should address a stated uncertainty, use scientifically meaningful alternatives, and disclose results that materially change the interpretation.

04 · A Practical Example

Planning Sensitivity Analyses for Missing Outcomes in an Educational Intervention

Hypothetical Example

AI-Assisted Feedback and Academic Writing Performance

A randomized study evaluates whether AI-assisted formative feedback improves undergraduate writing performance.

The primary analysis estimates the effect of assignment on final writing scores, adjusting for baseline performance. Researchers anticipate that some students will miss the final assessment.

The team recognizes that missingness may be related to unobserved writing performance even after accounting for recorded baseline characteristics.

Analysis Assumption or scenario Purpose
Primary analysis Missing outcomes are missing at random conditional on specified observed information. Estimate the primary treatment effect.
Sensitivity scenario A Missing outcomes in both groups are modestly lower than predicted under the primary model. Examine a plausible unfavorable departure from missing at random.
Sensitivity scenario B Missing outcomes in the intervention group are lower than predicted by a larger amount. Examine differential missingness assumptions.
Tipping-point analysis Vary departures over a prespecified range. Identify when the substantive conclusion changes.
Identify the vulnerable assumption

The team recognizes that missing-at-random assumptions may not adequately describe students who fail to complete the final writing assessment.

Collect relevant baseline information

Researchers record baseline writing scores and other justified predictors of missingness and outcomes, while minimizing unnecessary participant burden.

Prespecify alternative scenarios

The analysis plan defines meaningful shifts from the primary imputation assumptions using the writing-score scale and substantive reasoning.

Conduct the primary analysis

The team implements the prespecified primary estimation procedure without selecting it according to the observed treatment effect.

Evaluate sensitivity

Researchers estimate how the treatment effect and its uncertainty change across the alternative missingness scenarios.

Interpret the range of findings

The report explains whether the substantive conclusion remains similar or depends on assumptions about the unobserved writing scores.

Suppose the hypothetical primary analysis suggests a favorable intervention effect, but plausible missing-not-at-random scenarios produce substantially smaller estimates.

The researchers should not describe the finding as unequivocally robust. Instead, they should explain that the conclusion depends partly on assumptions about missing outcomes.

These scenarios are illustrative rather than evidence that any particular missingness mechanism occurred. Their scientific value depends on how plausibly they represent the study's missing-data process.

05 · What Researchers Often Get Wrong

Common Misconceptions About Sensitivity Analysis Planning

Misconception

Sensitivity Analyses Are Only Necessary After Problems Appear

Important uncertainties can often be anticipated during design. Early planning may identify additional measurements or safeguards needed to make sensitivity analyses informative.

Misconception

Running More Models Automatically Makes Findings Robust

Several models may share the same bias or assumptions. Sensitivity analyses should examine meaningful uncertainties rather than maximize the number of statistical specifications.

Misconception

Consistent Sensitivity Results Prove That the Study Is Unbiased

Consistency supports robustness only to the assumptions examined. It does not establish the absence of unmeasured confounding, selection bias, or other untested problems.

Misconception

Every Alternative Model Is a Sensitivity Analysis

Some models estimate different quantities or answer different questions. Researchers should distinguish sensitivity analyses from supplementary analyses involving alternative estimands.

Misconception

Only Sensitivity Analyses Supporting the Primary Result Need Reporting

Analyses that weaken or contradict the primary conclusion may be particularly informative and should not be selectively omitted.

Misconception

Sensitivity Analysis Can Repair Any Weak Research Design

Sensitivity analyses can quantify uncertainty under assumptions, but they cannot necessarily recover missing measurements or eliminate serious design bias.

06 · What This Means for You

How to Select Sensitivity Analyses Before Collecting Data

Begin with the primary estimand and analytical strategy. Identify the assumptions most likely to affect the credibility of the intended conclusion.

Then determine which alternative assumptions can be examined meaningfully and whether the study must collect additional information to support those analyses.

A simple decision framework

If conclusions depend on assumptions about missing outcomes
Plan plausible alternative missingness scenarios and collect relevant predictors of missingness.
If observational causal claims may be affected by unmeasured confounding
Consider quantitative bias analysis suited to the effect measure and causal assumptions.
If measurement error could materially affect estimates
Evaluate whether validation measurements or defensible error scenarios are feasible.
If alternative statistical specifications are scientifically plausible
Identify the assumptions they test and whether they estimate the same target quantity.
If sensitivity results differ substantially
Explain which assumptions drive the differences and qualify the conclusion accordingly.

Useful sensitivity analyses should reveal what a conclusion depends on, not merely provide additional opportunities to obtain a favorable statistical result.

07 · A Quick Checklist

Before Finalizing Sensitivity Analyses

Before data collection begins, check:
Define the primary analysis and the target quantity it estimates.
Identify consequential assumptions involving missingness, confounding, measurement, or model specification.
Prioritize assumptions that are uncertain and could materially change conclusions.
Specify scientifically meaningful alternative scenarios and their rationale.
Determine whether additional baseline, validation, or follow-up measurements are required.
Distinguish sensitivity analyses from supplementary analyses targeting different estimands.
Document analytical methods, parameter ranges, and interpretation criteria.
Establish procedures for reporting additional analyses developed after data inspection.
Commit to reporting sensitivity results even when they weaken the primary conclusion.
08 · Frequently Asked Questions

Frequently Asked Questions About Sensitivity Analysis Planning

Should sensitivity analyses be planned before data collection?

Important sensitivity analyses should generally be planned early, especially when they address assumptions that materially affect the primary conclusion or require additional measurements.

Must every sensitivity analysis be prespecified?

No. Unforeseen problems may justify additional analyses. However, important planned assessments should be documented prospectively, and later analyses should be identified transparently.

Is sensitivity analysis the same as robustness testing?

The terms overlap, but sensitivity analysis specifically examines dependence on assumptions or analytical choices. Some robustness checks may instead address different estimands or questions.

Can sensitivity analysis eliminate unmeasured confounding?

No. It may quantify how hypothetical unmeasured confounding could affect results, but it cannot prove that confounding is absent.

What if sensitivity analyses disagree with the primary analysis?

Researchers should evaluate which assumptions produce the differences, assess their plausibility, and qualify the primary conclusion where necessary.

Do consistent sensitivity results prove that findings are valid?

No. They demonstrate robustness only to the assumptions examined. Other biases or design weaknesses may remain.

Can sensitivity analyses be exploratory?

Yes. Exploratory sensitivity analyses may be informative when their rationale, timing, assumptions, and limitations are reported transparently.

09 · The Bottom Line

Plan to Test the Assumptions That Matter Most

The Bottom Line

Sensitivity analyses should be considered during research design because they reveal how conclusions may depend on uncertain assumptions and can identify additional information needed before data collection. The most useful analyses examine scientifically plausible alternatives that could materially affect interpretation.

Prespecify important analyses, preserve justified flexibility, and report results transparently. Sensitivity analysis strengthens research when it exposes the conditions under which conclusions remain credible, including circumstances in which those conclusions become less certain.

10 · Sources and Further Reading

Foundational Research and Guidance on Sensitivity Analysis

11 · Cite this Guide

How to Cite This Guide

This guide is intended to be read, shared, and used in research, teaching, and academic work. If you draw on its ideas, explanations, or other content, please acknowledge the source by citing the guide. Doing so gives appropriate credit and helps your readers locate the original resource.

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