Manuel B. Garcia

Manuel B. Garcia serves as the Senior Director for Educational Technology and Digital Learning at FEU Institute of Technology, Manila, Philippines. Read More

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Which Policies and Rules Govern AI Use in Academic Research?

AI use in research is rarely governed by a single policy. Researchers may need to comply simultaneously with laws, university rules, ethics approvals, funder conditions, journal policies, and research-team agreements.

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AI Policies and Rules in Research Guide 81 of 795
01 · The Question

Which AI Rules Actually Apply to Your Research?

You use an AI tool to help write code for an analysis, summarize articles, improve a paragraph, or examine research data. Which policy tells you whether that use is allowed?

The answer is less tidy than many researchers expect. There is rarely one document called "the AI policy" that settles everything. Academic research operates within overlapping systems of law, research ethics, institutional governance, funding requirements, publication standards, contractual obligations, and professional norms. AI has been inserted into that existing regulatory environment rather than replacing it with a single new rulebook.

This matters because permission from one authority does not necessarily mean permission from another. Your university may permit a particular AI tool while your ethics approval restricts how participant data can be processed. A funder may allow AI-assisted proposal preparation while imposing conditions on its use. Later, the journal receiving your manuscript may have its own disclosure or confidentiality requirements.

The practical question, therefore, is not simply "Am I allowed to use AI?" It is "Which rules apply to this particular AI use, at this particular stage of this particular research project?"

02 · The Short Answer

AI Use in Research Is Usually Governed by Several Layers of Rules

In Brief

No single universal policy governs AI use in academic research. Depending on the project, researchers may simultaneously be subject to applicable law, university and institutional policies, research ethics requirements, funder conditions, contractual obligations, journal or publisher policies, and rules agreed within the research team.

Which requirements matter depends on what you are doing with AI, what information you give the system, where the research is conducted, who funds or oversees it, and where the resulting work is submitted. Before using AI for a consequential research task, identify every authority that has jurisdiction over that task rather than checking only one policy.

03 · What You Need to Know

Think of AI Governance as a Stack of Overlapping Requirements

A useful way to understand AI governance in research is as a policy stack. Different layers answer different questions, and several layers may apply to the same action.

Layer What It May Govern Where to Check
Law and regulation Personal data, confidentiality, intellectual property, automated processing, sector-specific requirements, and other legally regulated activities Applicable legislation and regulators
University or research institution Approved tools, information security, research integrity, data handling, procurement, disclosure, and acceptable use Research office, institutional policies, IT/security office, data protection office
Research ethics oversight Participant data, consent, confidentiality, approved methods, risks, and changes to an approved protocol Research ethics committee or institutional review board and the approved protocol
Funder or sponsor Proposal preparation, confidential application material, project conduct, reporting, data management, and award conditions Funding call, award terms, grant policy, and funder guidance
Contract or collaboration Confidential information, data sharing, intellectual property, security obligations, and permitted technologies Research agreements, data-use agreements, contracts, consortium agreements
Journal or publisher AI-assisted writing, disclosure, authorship, images, peer-review confidentiality, and manuscript preparation Journal instructions and publisher editorial policies
Research team Internal expectations for permitted tools, documentation, verification, disclosure, and responsibility Project protocol, lab rules, team agreement, or AI-use plan

Law Can Apply Even When It Does Not Mention Generative AI

Researchers should not assume that only laws containing the words "artificial intelligence" matter. Existing rules governing personal data, confidentiality, copyright, intellectual property, consumer protection, research involving particular populations, and regulated sectors may affect an AI-assisted research activity even if those rules predate modern generative AI.

Data protection is an especially important example. Sending information to an external AI service is itself a form of data processing in many circumstances. Whether it is permissible may depend on what information is transferred, the legal basis for processing it, where it goes, how the provider handles it, and what safeguards are in place.

In the Philippines, for example, the National Privacy Commission's Advisory No. 2024-04 specifically addresses the application of the Data Privacy Act of 2012, its implementing rules, and NPC issuances to AI systems processing personal data. The advisory makes clear that these technology-neutral data-protection requirements can apply to the development or deployment of AI systems when personal data are processed, including during training and testing.

Watch Out

Removing participants' names does not automatically make research data safe to upload to a public AI service. Data may remain identifiable through combinations of variables, free-text responses, locations, unusual characteristics, or other contextual information. Check the actual data and the applicable privacy and institutional requirements rather than relying on filenames such as "anonymous_data.csv."

Your Institution Can Add Rules Beyond the Law

Universities and research organisations commonly establish requirements that go beyond minimum legal obligations. These may appear in a dedicated AI policy, but they may also be distributed across research-integrity policies, information-security rules, data-management procedures, acceptable-use policies, ethics guidance, software procurement rules, and policies on confidential or sensitive information.

This is why searching only for a document titled "AI Policy" can miss relevant requirements. The practical process for finding your university's applicable AI rules may require checking several institutional sources.

Rules can also vary within a university. A central institutional policy may establish the baseline while a laboratory, research centre, faculty, hospital, or other unit imposes additional requirements because it handles particular forms of data or operates within a regulated environment. Whether different departments can impose different AI requirements therefore matters when research crosses organisational boundaries.

Your Ethics Approval May Govern AI Use Even Without an AI-Specific Clause

Research involving human participants creates another layer. An ethics committee or institutional review board may have approved a particular protocol describing how data will be collected, stored, accessed, analysed, and shared. Introducing an external AI service can alter that arrangement.

For example, a study may have been approved on the understanding that interview transcripts remain on encrypted institutional systems and are accessible only to named members of the research team. Uploading those transcripts to an external generative AI platform for thematic coding could raise questions about confidentiality, data transfer, consent, security, and whether the processing remains consistent with the approved protocol.

Consequently, the relevant question is not only whether the institution generally allows the AI tool. Researchers may also need to determine whether the proposed use remains within the approved study or whether research ethics requirements restrict that use.

Funders Can Establish Their Own AI Conditions

Funding organisations can regulate activities associated with applications, assessments, funded research, or reporting. These requirements are not necessarily identical across funders.

Current policies illustrate the variation. UK Research and Innovation has a policy addressing generative AI in funding application preparation and assessment. The U.S. National Science Foundation has issued requirements concerning generative AI and confidentiality in its merit-review process, including restrictions on reviewers uploading proposal materials to non-approved generative AI tools. The U.S. National Institutes of Health has gone further in a different context: effective for applications submitted to the September 25, 2025 receipt date and beyond, NIH states that applications or sections substantially developed by AI will not be considered the applicants' original ideas.

These are not universal rules for all research. They are examples of why researchers need to check the particular AI restrictions imposed by their funder rather than generalising from another organisation's policy.

Contracts and Data Agreements Can Create Additional Restrictions

Some obligations come from agreements rather than general institutional policy. Industry-sponsored projects, clinical collaborations, licensed datasets, restricted-access archives, government data, and multi-institution projects may be governed by contracts, nondisclosure agreements, data-use agreements, or consortium agreements.

A dataset may be available to you for research without being available for transfer to a third-party AI provider. Similarly, a collaboration agreement may require confidential project information to remain within specified systems. The fact that you are authorised to access information does not necessarily mean you are authorised to disclose it to another service for processing.

Journals and Publishers Govern What Happens at Publication

Publication introduces another authority. Journals and publishers increasingly maintain policies concerning AI-assisted manuscript preparation, disclosure, authorship, generated or modified images, editorial confidentiality, and the use of AI during peer review.

The International Committee of Medical Journal Editors, for example, states that AI and AI-assisted technologies should not be listed as authors and that humans remain responsible for the accuracy and integrity of AI-assisted content. Its recommendations also call for transparency about AI use and warn that uploading submitted manuscripts to AI systems can violate confidentiality where confidentiality cannot be assured.

A journal's rules can therefore matter even when the researcher's institution permits the underlying tool. Whether a journal can impose stricter AI requirements is best understood as a separate publication-governance question.

Professional Guidance Is Not Necessarily the Same as Binding Policy

Researchers will also encounter recommendations from scholarly associations, international organisations, editorial groups, and research-integrity bodies. These documents can be highly influential without necessarily having the same status as legislation, a grant condition, or an institutional rule.

For example, the European Research Area's Living Guidelines on the Responsible Use of Generative AI in Research provide recommendations for researchers, research organisations, and funders. The guidelines were updated in May 2026 to reflect technological developments while continuing to emphasise research integrity, accountability, transparency, and responsible use. UNESCO likewise provides broader guidance on generative AI in education and research.

Binding requirement A rule that applies to you through law, regulation, institutional authority, ethics approval, contract, grant conditions, submission terms, or another applicable obligation.
Guidance or recommendation Advice or a normative framework that may inform good practice but is not automatically binding unless adopted or incorporated by an authority governing your work.

The distinction matters. A respected international guideline can help you decide what responsible practice looks like, but it does not automatically override a legal requirement, an approved ethics protocol, or a journal's submission policy.

Different Rules Can Apply at Different Stages of the Same Project

The relevant policy set can change as research moves from idea to publication. During proposal development, funder rules may be especially important. During participant recruitment and data collection, ethics and privacy requirements may dominate. During analysis, institutional data-security requirements and the approved methodology become particularly relevant. During manuscript preparation and submission, journal and publisher rules enter the picture.

This also explains why a one-time policy check at the beginning of a multiyear project may not be enough. AI services and organisational policies change quickly, so researchers conducting long projects may need a deliberate process for tracking changes in applicable AI policies.

The AI Task Matters as Much as the AI Tool

A policy rarely becomes meaningful merely because "AI was used." What matters is what the system was asked to do and what information was exposed to it.

Using an approved AI assistant to rephrase a non-confidential sentence may create a very different risk profile from uploading raw interview transcripts. Generating exploratory code from a hypothetical example differs from asking AI to analyse identifiable participant data. Using AI to brainstorm search terms differs from allowing it to generate substantive sections of a funding application.

For policy purposes, document the activity at a useful level of specificity: the tool or system used, the task performed, the information supplied, the output produced, how the output affected the research, and what human verification occurred.

04 · A Practical Example

One AI Task Can Trigger Several Policies at Once

Hypothetical Example

Using Generative AI to Help Analyse Interview Transcripts

A researcher has conducted 40 semi-structured interviews for a funded study involving human participants. The researcher wants to upload the transcripts to a commercial generative AI service and ask it to suggest preliminary themes.

1. Check applicable law The transcripts contain information about identifiable individuals. The researcher first determines what data-protection and confidentiality requirements apply to processing and transferring those data.
2. Check institutional rules The university allows generative AI for some research activities, but its information-security policy prohibits confidential research data from being entered into unapproved external services.
3. Check the ethics approval The approved protocol states that transcripts will be stored on institutional systems and accessed only by the research team. The proposed external processing was not described in the protocol.
4. Check the funding and contractual conditions The researcher confirms whether the award, data-management plan, sponsor requirements, or project agreements impose additional restrictions.
5. Check the intended journal later If AI eventually contributes substantively to the analysis or reporting, the researcher checks the target journal's current disclosure and reporting requirements before submission.
Result The researcher's general permission to use AI does not answer whether this specific use is permitted. The decisive issue may instead be the proposed transfer and processing of participant data through a particular service.

The example illustrates a broader principle: AI compliance is usually activity-specific. Asking "Does my university allow ChatGPT?" is often too broad to produce a useful answer. Asking "May I upload these interview transcripts to this version of this service for this analytical purpose under my approved protocol?" is much closer to the question that actually needs answering.

05 · What Researchers Often Get Wrong

Common Mistakes When Interpreting AI Policies

Misconception

If My University Allows AI, I Can Use It Throughout My Research

Institutional permission is only one layer. A particular use may still be constrained by law, ethics approval, funder requirements, contracts, data-use agreements, or the publication policy that later applies. "The university allows AI" is therefore not a blanket authorisation for every research activity.

Misconception

If There Is No AI-Specific Policy, There Are No Rules

Many relevant obligations predate generative AI. Privacy, confidentiality, research integrity, intellectual property, information security, ethics, and contractual requirements may govern an AI-assisted activity without mentioning AI by name. The absence of an AI-specific document should not be interpreted as an unregulated space.

Misconception

The Strictest AI Policy I Can Find Automatically Applies

Not necessarily. A policy must first have some authority over your research, submission, funding arrangement, institution, or activity. A restrictive rule from an unrelated university or publisher may be informative, but it does not automatically govern you. Identify applicable authorities before comparing their requirements.

Misconception

Disclosure Makes Any AI Use Acceptable

Transparency and permission are different issues. Disclosing that you uploaded confidential participant information to an unauthorised AI service does not retroactively make the transfer permissible. Disclosure requirements should be satisfied where applicable, but they do not replace privacy, ethics, security, contractual, or methodological requirements.

Misconception

Paying for an Enterprise AI Account Solves the Policy Problem

A service with stronger privacy, security, or contractual protections may resolve some concerns, but it does not automatically satisfy every applicable requirement. Researchers still need to consider institutional approval, the nature of the data, ethics commitments, contractual restrictions, methodological validity, and any disclosure obligations.

Misconception

AI Rules Only Matter When Writing the Manuscript

AI can enter research much earlier: literature searching, proposal development, study design, recruitment materials, data collection, transcription, coding, analysis, programming, visualisation, and interpretation. The governing rules may therefore become relevant long before a manuscript exists.

06 · What This Means for You

Check the Policy That Governs the Activity, Not Just the Tool

You do not need to read every AI policy ever written before asking an AI system to improve the wording of a non-sensitive sentence. Policy checking should be proportionate to the activity and its consequences.

The need for careful verification increases when AI will receive confidential, personal, sensitive, proprietary, unpublished, or contractually restricted information; influence research methods or analysis; contribute materially to a proposal or publication; interact with participants; or perform an activity governed by an external authority.

A simple decision framework

If AI will process personal, confidential, sensitive, proprietary, or unpublished information
Check applicable law, institutional data and security rules, ethics requirements, contracts, and the AI service's approved status before transferring the information.
If AI will materially affect study design, data collection, analysis, or interpretation
Check the approved protocol, methodological requirements, ethics approval, funder conditions, and documentation expectations.
If AI is being used for a funding application
Check the specific funder's current application policy rather than assuming ordinary institutional AI rules are sufficient.
If AI contributes to a manuscript, figure, image, code, or other submitted material
Check the target journal and publisher's current AI policy, including disclosure and authorship requirements.
If several institutions or collaborators are involved
Identify the requirements governing each participant, dataset, institution, and agreement rather than assuming one institution's policy controls the entire project.
If the applicable rules appear inconsistent
Do not quietly choose the most convenient interpretation. Identify which authorities govern the activity and seek clarification where necessary. The process for resolving conflicting university and journal requirements may depend on the particular obligation involved.

For collaborative work, it can also be useful to establish internal expectations before AI becomes embedded in the workflow. A documented AI-use plan at the beginning of a project can clarify permitted tools, restricted information, documentation practices, verification responsibilities, and disclosure expectations. Such an agreement supplements applicable external requirements. It cannot override them.

07 · A Quick Checklist

What to Check Before Using AI for a Research Task

Before using AI in research, check:
Identify exactly what you want the AI system to do rather than asking only whether "AI" is generally allowed.
Determine whether personal, sensitive, confidential, proprietary, unpublished, or otherwise restricted information will be entered into the system.
Check applicable laws and regulatory requirements, particularly those governing data protection and any regulated research domain involved.
Check your institution's AI, research integrity, information security, privacy, data-management, and acceptable-use requirements as relevant.
For human-participant research, compare the proposed AI use with the approved ethics protocol and determine whether further review or an amendment is required.
Review the current funder or sponsor requirements if the AI use concerns a proposal, funded project, report, or award condition.
Review contracts, data-use agreements, licences, confidentiality agreements, and collaboration agreements that may restrict third-party processing.
Before submission, verify the target journal or publisher's current AI policy rather than relying on a policy you remember from an earlier submission.
Document consequential AI use sufficiently to explain what tool was used, for what purpose, with what information, and how its output was checked.
Recheck relevant policies when the project, AI tool, dataset, collaborators, funder, institution, or publication destination changes.
08 · Frequently Asked Questions

Frequently Asked Questions About AI Rules in Research

Is there one universal AI policy for academic researchers?

No. Researchers operate under different legal jurisdictions, institutions, disciplines, funders, ethics arrangements, contracts, and publication venues. International guidelines can promote common principles, but they do not create one universal policy governing every researcher.

Which AI policy takes priority if several policies apply?

There is no universal hierarchy that resolves every case. The answer depends on the nature and authority of the requirements involved. A team agreement, for example, cannot override applicable law or an ethics requirement. When two independently applicable requirements differ, you may need to satisfy both or obtain clarification from the relevant authorities rather than assuming one automatically cancels the other.

Does the absence of a university AI policy mean I can use AI however I want?

No. Existing policies on privacy, research integrity, ethics, confidentiality, information security, intellectual property, and data management may still govern the activity. If institutional guidance is unclear, the process for determining what university rules apply may require consulting the appropriate research, ethics, IT, or data-protection office.

Can a journal prohibit something my university permits?

A journal can establish conditions for material it considers for publication, subject to applicable law and its own governance. Institutional permission to use a tool therefore does not guarantee that every use will comply with a particular journal's submission requirements.

Do AI policies apply only to generative AI such as ChatGPT?

Not necessarily. Some policies specifically regulate generative AI or large language models, while broader rules may apply to machine learning, automated decision-making, transcription systems, image generators, coding assistants, analytical tools, or other AI-enabled systems. Read the policy's scope and definitions rather than assuming every document uses "AI" in the same way.

Do I need to disclose every use of AI in my research?

Not under one universal rule. Disclosure expectations vary by institution, funder, journal, discipline, and type of use. Substantive use in methods, analysis, or content generation may warrant different treatment from routine functionality embedded in ordinary software. Follow the disclosure requirements that actually govern the work and provide enough methodological information for transparency and reproducibility where relevant.

What if the journal I want to submit to has no clear AI policy?

The absence of a clear journal policy does not eliminate your other responsibilities. Continue to follow applicable institutional, ethical, legal, and research-integrity requirements, and consider seeking clarification from the journal when the AI use could materially affect submission compliance. A separate issue is how to proceed when a journal provides no clear AI guidance.

Can AI policies change while my research is underway?

Yes. AI technologies and the policies governing them continue to change. A rule that applied when a project began may be revised before analysis, reporting, or publication. Researchers should therefore consider what to do when AI rules change during an ongoing project, particularly when the new requirement affects planned future activities.

09 · The Bottom Line

There Is No Single AI Rulebook for Research

The Bottom Line

AI use in academic research may be governed simultaneously by law, institutional policy, research ethics requirements, funder conditions, contracts, journal policies, and research-team rules, so checking only one source is rarely enough for consequential uses.

Start with the specific activity rather than the name of the AI tool. Ask what the system will do, what information it will receive, and which authorities govern that part of your research. Then verify the current requirements at each relevant layer before proceeding.

10 · Sources and Further Reading

Authoritative Sources on AI Governance in Research

11 · Cite this Guide

How to Cite This Guide

This guide is intended to be read, shared, and used in research, teaching, and academic work. If you draw on its ideas, explanations, or other content, please acknowledge the source by citing the guide. Doing so gives appropriate credit and helps your readers locate the original resource.

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